Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPRRPH
2ODK Chain:A ((4-53))
-HVWPVQDAKARFSEFLDACIT-EGPQIVSRRGAEEAVLVPIGEWRRLQAAA-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ODK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22726 for 279 contacts (-81.5/contact) +
2D Compatibility (PS) -5456 + (NN) -2432 + (LL) 2624
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -32790.0 ( -117.53 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_2ODK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ODK-query.scw
PDB file :
Tito_Scwrl_2ODK.pdb
: