Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVHVVDHPLAAARLTTLRDERTDNAGFRAALRELTLLLIYEATRDAPCEPVPIRTPLA-ETVGSRLT--KPPLLVPVLRAGLGMVDEAHAALPEAHVGFVGVARDEQTHQPVP-------YLDSLPDDLTDV-PVMVLDPMVATGGSMTHTLGLLISRGAADITVLCVVAAPEGIAALQKAAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFGPR
1XTT Chain:D ((2-216))
-PLYVIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVEGLLKAFPKARQGVIGASR-------VPKDMDVYIYYKKIPDIRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG--
General information:
TITO was launched using:
RESULT:
Template:
1XTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167829 for 1574 contacts (-106.6/contact) +
2D Compatibility (PS) -21174 + (NN) -5004 + (LL) 392
1D Compatibility (HY) -19600 + (ID) 3650
Total energy: -216865.0 ( -137.78 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_1XTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XTT-query.scw
PDB file :
Tito_Scwrl_1XTT.pdb
: