Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAA-TELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIA---ALPDAVRSPDLIALSQLICRREC |
4JXY Chain:A ((18-345)) | ---------LYFQSMDLDHILSLAEPDMLAVNQLIQKQVNSDVSLINQLGFYIV-----------NSGGKRLRPLLTVLAARALNIQTEQHHTLAAIIEFIHTATLLHDDVVD---------TANEVFGNQASVLVGDFLYTRSFQMMVTLDS----MRVMQILSDATNVIAEGEVLQLMNCNDPDTTEESYMEVIYSKTARLFEAATLLAGVLTKQSEAIENAMQDYGKYLGTAFQLVDDIMDYA----------GDDLAEGKPTLPLLYAMWHGNEQQTAIIREAIETG--NGMDNLTPILETMEQTGALTYTKQQALKASQQAIDALSPIEESVYKEALIGLAHISVERVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218248 for 2604 contacts (-83.8/contact) +
2D Compatibility (PS) -32962 + (NN) -18925 + (LL) 1416
1D Compatibility (HY) -16800 + (ID) 3800
Total energy: -289319.0 ( -111.11 by residue)
QMean score : 0.474
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