Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MR--------KSLVALLLLAA--SGLAQAQVDLREGH------PDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYVDGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYARGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEG-DVATLALTRTTQEVRLGDRLFPTEERAVNSTFMPGEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRT---YKKLSYALVLMASRPLSVTDRVQNP-- |
4NTC Chain:A ((2-326)) | MSIGKLLSNGALLVDVLIIGAGPAGLSTATGLARQLHTAVVFDSGVYRNAKTQHMHNVLGWDHRNPAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDNEGH----SWYGRKVVLATGVRDIPLD------------------------IEGYSECWANGIYHCLFCDGYEERGQETVGVLALGPIA-NPARALHLARMALRLSESVTIYTNGNEQLAKEIQQAAEESPVGASGLKFEARPIR-RFEKGDVAKTV---IVHLGESESKTEGFLVYNPQTEVNGPFAKQLALNMTEGGDILTTPPFYET-----SVPGVFAVGDCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12866 for 2467 contacts (-5.2/contact) +
2D Compatibility (PS) -32211 + (NN) -5406 + (LL) 2640
1D Compatibility (HY) -6800 + (ID) 2850
Total energy: -57493.0 ( -23.30 by residue)
QMean score : 0.117
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