Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLARDGFGPAERQGVRTLVRDKLVRHRYLHQIGLYSDFHHESDALRELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHI----------RLADQASADKVYAELRGGLAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQ--KADTVSQPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL------------------- |
| 3NRK Chain:A ((50-361)) | ---------------------------------LNRVIATVGTVSISELDLDDATEKYNRLQKHLKHED-YRKSFRTRIIDFLIDRAIVDVVAEEESIQVN-----------EQRVDSEIEKRMEVMGITNRKQFEKTMETSSG----------------------------------------------------------MPFELWVTELPYQIKKGQLLQLKIAVP----------------------------------------PPNEQEIRSWYNQNKDKVGFEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPR-NDPALRARRGMVEWISSFDLYKYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEGKRPT---PMENLRGGIQNILYRDKEEDTFHRWLKESRAEIPIQIFDEAYRKENKIPLKEETFHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1506 for 1918 contacts (0.8/contact) +
2D Compatibility (PS) -31316 + (NN) -16947 + (LL) 11160
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -40947.0 ( -21.35 by residue)
QMean score : 0.413
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