Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYA--KVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ----- |
| 1PYS Chain:B ((191-399)) | LKAEALPLPFALKVEDPEGAPHFTLGYAFGLRVAPSPLWMQRALFA-----AGMRPINNVVDVTNYVMLERAQPMHAFDLRFVG-EGIAVRRAREGERLKTLD--------------GVERTLHPEDLVIAGWR----GEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRT---------EASHRFERGVDPLGQVPAQRRALSLLQALAGARVAEALLEAGSPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39618 for 1634 contacts (-24.2/contact) +
2D Compatibility (PS) -19537 + (NN) 6936 + (LL) 2384
1D Compatibility (HY) -400 + (ID) 1600
Total energy: -51835.0 ( -31.72 by residue)
QMean score : 0.222
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