Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MPLRLTITS-YHKLTPGQCSEKVLDQGQLTIGRGPDNDWVLPDPERLVSSRHCTILN--RDGVYYLTDTSTNGVLLVNAGHRLRRGNSEPLQDGETVRLGEYDILVQLGHDIALPGSGNPQTDPFTSFDALMSRQAAGSAPAFAEPAPTPHPAVTAHFQGGSPLDTKPDLFDFLTPPPPGAAPRPDHVPAEQHDFRPPEPVIPPPPATTPAPPPAGGAPLIPADWDPFAELLGNTPAPSATPVAQPLPTAEPTPLAMPFADPGITQQPQPQPQPQPQPQPQPQPQPQPASVAAPTPPASAAASAGGDLLQAFLRGAGMTQLKVDPAGAEAQMEAIGRSYRGLVEGLVDVLRARASLKGEFRMAQTMIQPVQNNPLKFAPNVDEAMLLLLRRDNQAFMAPDRAVADSFEDLKAHQLAVMAGVQAAIRHLLARFEPAALEARFGKPAGLSGLLPGARQAQNWDSFTELYAKILREAEDDFQELFGREFSRAYEEHSARLRRS |
1MZK Chain:A ((177-298)) | LGSSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSE--VSGKHAQITWNSTKFKWELVDMGSLNGTLVN-SHSISHPDLGSRKWGNPVELASDDIIT-LGTTTKVYVRISSQNE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55492 for 906 contacts (-61.2/contact) +
2D Compatibility (PS) -12788 + (NN) -9892 + (LL) 19236
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -62236.0 ( -68.69 by residue)
QMean score : 0.402
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