Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTALPARL---DGVVIGVLLDVPDAAAPVVAYPGCPS--EHGLAAATTTQLSRADIGAQVALMFVAGDPR---QPLLIGRIQRLP-----QEALAQLDGERLEFSAEREIVLRCGKAS-----------ITLTRAGKVIIR--GAYLSSRSTGVNRIKGGSVQIN
1ON4 Chain:A ((1-174))
HMLEIKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTLK-
General information:
TITO was launched using:
RESULT:
Template:
1ON4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39915 for 997 contacts (-40.0/contact) +
2D Compatibility (PS) -15298 + (NN) 1524 + (LL) -80
1D Compatibility (HY) -400 + (ID) 1250
Total energy: -55419.0 ( -55.59 by residue)
QMean score : 0.156
(partial model without unconserved sides chains):
PDB file :
Tito_1ON4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ON4-query.scw
PDB file :
Tito_Scwrl_1ON4.pdb
: