Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAK-LRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVV------AYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP |
| 3T8I Chain:B ((2-306)) | ---------------------------------------RKVIVDSDTATDDTIAILLA---SRFFQLLGVTIVAGNVNYNQEVKNALFTLEYIGKQDVPVYLGSQRPILGNWRTVEEVHGSNGMSNWNYPEPNKRPEKEHAIDAILR-LSKEHEGELEILAISPLTNIALAYLKDPSVVKRVKKIWIMGGA-FSKGNTTPIAEFNFWVDPEAAKIVLDAGFDITIVPWEVAEISGSLNERDWEYISKLNTKLSNFFINVNKTLKEYTTKNQGISGSIHPDSLTVSIAHDNSIILDSSL---KYVDVELCSK---SRGAMLIDWYSLHKNKPNAEIVLKADGGKFKNLLFNSLSQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T8I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136946 for 2722 contacts (-50.3/contact) +
2D Compatibility (PS) -32706 + (NN) -18357 + (LL) 3108
1D Compatibility (HY) -22400 + (ID) 5150
Total energy: -212451.0 ( -78.05 by residue)
QMean score : 0.472
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