Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRSNGSSSRRTFLRLAALLLPAGALLGSLPGVRAAARPRKLYLAGPDVFRADAVAHGEALKALCARYG--F--EGLYPLDNALPK-------QLAEPREQAAWIYRANIGLIERADAVLANLNFFRGAEPDSGTAFEVGYATALGKPVYGYVDDAGSYAERIRRHAPELIGEDPTRDRDGMTLEEFGLPLNLMLAVPATLVVGDAEQALRQLASRRHG |
1F8Y Chain:A ((2-142)) | -------------------------------------PKKTIYFGAGW-FTDRQNKAYKEAMEALKENPTIDLENSYVPLDNQYKGIRVDEHPEYLHDKVWATATYNNDLNGIKTNDIMLGVYI---PDEEDVGLGMELGYALSQGKYVLLVIPDEDY-----------------------------GKPINLMSWG-VSDNVIKMSQLKDFNFNKPRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35602 for 942 contacts (-37.8/contact) +
2D Compatibility (PS) -14234 + (NN) -8194 + (LL) 4496
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -59784.0 ( -63.46 by residue)
QMean score : 0.454
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