Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRDRNLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYIASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALIDQGVDVVFQHT-DSPAPIQAAERRGVYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 4B46 Chain:A ((1-367)) | MKLAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQSRVKGHGVGADNELGA-EIAEEDIDEVQGAIDSIPVHEVD-------------AFLVVSGLG------------------GGTGSGGAPVLAKHLKRIYTEPVYGLGILPGSDEGGIYTLNAARSFQTFVREVDNL-LVFD--------NDAWRKTGESVQGGYDEINEEIVNRFGVLFGSVVDSSEIINTLAGGGVSTVGYASEGVTAHTTNRITSLVRKAALGRL---------TLPCEI--EGAERALLVLAGPPEHLNRKGIERGRKWIEE-QTGSM-EVRGGDYPIPGAEKVAGVILLSGVTNVPRIKELQQVAIEAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125650 for 2661 contacts (-47.2/contact) +
2D Compatibility (PS) -31861 + (NN) 2624 + (LL) 4296
1D Compatibility (HY) -6800 + (ID) 3150
Total energy: -160541.0 ( -60.33 by residue)
QMean score : 0.251
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