Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANK--EAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGAVQPCGVGIFVWTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKP-YIHWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQRLAMVW-------SGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR--- |
| 4R6Y Chain:A ((1-317)) | -------------------SMESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAAEKLLANFNT----DTASAIPDANNLYSPLVKNYLSFI-YNSKLLKTAPASWQDLLD-GKFKNK------LQYST-PGQAADGTAV--MLQAFHSFGSKDAGFAYLGKLQANNVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSE-LSWGMPVRSDVTPSD----EHYKAATAALEGVQSWQ-PNWDDVAVSLSADISRWHKVTES |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72943 for 2620 contacts (-27.8/contact) +
2D Compatibility (PS) -32626 + (NN) -11661 + (LL) 2828
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -126652.0 ( -48.34 by residue)
QMean score : 0.333
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