Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
4I09 Chain:A ((24-221))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKLGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGT-
General information:
TITO was launched using:
RESULT:
Template:
4I09.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137873 for 1437 contacts (-95.9/contact) +
2D Compatibility (PS) -21557 + (NN) -7261 + (LL) 1344
1D Compatibility (HY) -24400 + (ID) 6650
Total energy: -196397.0 ( -136.67 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_4I09.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I09-query.scw
PDB file :
Tito_Scwrl_4I09.pdb
: