Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIA----NTRLVTQNVDDLHERAGSRDVLHLHGSLHAPRCATCA---AAYRDAL---------PDSVEPEEGRRIE-PPRC--PACGGQVRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRTRHPREHCLVGPAGEVLPELLRRAFPG
4UTZ Chain:B ((13-274))
LTAFREHFAKAKHIAIITGAGVSAESGVPTFRGP-GGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMECT-----FKYHFEGPCGSTLPPALE-----
General information:
TITO was launched using:
RESULT:
Template:
4UTZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130984 for 1918 contacts (-68.3/contact) +
2D Compatibility (PS) -26043 + (NN) -16141 + (LL) 668
1D Compatibility (HY) -16000 + (ID) 5200
Total energy: -193700.0 ( -100.99 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_4UTZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UTZ-query.scw
PDB file :
Tito_Scwrl_4UTZ.pdb
: