Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSEPLEPNQDVIIPRS-RDSLGRPVYKAQLTRTDNQSEKVALIRQTAPLPVIFIPGIMGTNLRNKADKSEVWRPPNGLWPMDDLFASIGALWTWAWRGPKARQELLKAEQVEVDDQGTIDVGQSGLSEEAARLRGWGKVMRSAYNPVMGLMERRLDNIVSRR--ELQAWWNDEALSPPGD-QGEEQGKVGP-IDEEELLRASRYQFDVWCAGYNWLQSNRQSALDVRDYIENTVLPFYQKECGLDPEQMRRMKVILVTHSMGGLVARALTQLHGYERVLGVVHGVQPA----TGSSTIYHHMRCGY--EGIAQVVLGRNAGEVTAIVANSAGALELAPSAEYREGRPWLFLCDAQGQV-LKDIDGKPRAYPQNQDPYEEIYKNTTWYGLVPEQNSQYLDMSDKKEGLRVG-PRDNFEDLIDSIANF-HGELSAAGYHSETYAHYGADDSRHSWRDLIWKGDPTPLETPGATLNDDENGTYNSWFRRGLPTIV-QGPL-ETGNPLDASGSGGDETVPTDSGQAPALAGVKASFRHGSKGKGQANTKRGYEHQESYNDARA---QWAA--LYGVIKITQLADWHPNDKGGT |
| 5BP8 Chain:A ((6-520)) | ---APREAEAAALLAATVADPWGLV-----------APSVYDTARLVSLAPWLDGHRERLGYLAKEQNQDGSWGAPDG-YGLVPTLSAVEALLTELARTDSGAPHLSPDDLAAACADGLGALRDGLLAGPVPDTIG----VEFVAPSLLADINTRLAALTEQAPGKLGAWSGTTLTSPAPDLDGALLAGVREMTEQAPLPEKLWHTLEAVTRDGTRGARPHEGAPPHNGSVGCSPAATAAWLGAAPDPAAPGVAYLRDVQARFGGPVPSITPIVYFEQAW-VLNSLAASGLRYEAPAALLDSLEAGLTDEGIAAAPGLPSDSDDTAAVLFALAQ-------HGRTHRP--------DSLMHFRRDGYFSCFGVERTPSTST--NAHILEALGHHVTVR-PDDAGRYGAEIRMISDWLLDNQLPDGSWMDKWHASPYYATACCALALAEFGGPSARAAVDRAAAWALATQRA------DGSWGRWQGTTEETAYMVQLLMRTRTP-------------------------------GSPGTVARSAARGCDALLAHDDPASYPGLWHDKDIYAPVTVIRAARLAALALGGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 68816 for 4391 contacts (15.7/contact) +
2D Compatibility (PS) -49759 + (NN) -5527 + (LL) 3768
1D Compatibility (HY) 10800 + (ID) 2750
Total energy: 25348.0 ( 5.77 by residue)
QMean score : 0.193
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