Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDTSPDLPAMSPLAVYRQAVEQRGFAPDEAQRRAAEALERCFQALHEAHRHGAIQGVYLWGPVGRGKTWLMDHFYQCLRVPARRQHFHHFMQWVHQRQFELTGTADPLRALARELARDVRVLCFDELFVSDIGDAILLGSLLRIMFEEGVVLVATSNQPPEQLYADGFNRERFLPAIEAIQRHMAVVAVDGGQDHRLHPGRAEQRYWVVEAGQASGFAELFARLSAGEAASTQPIELGHRPLAVHRHSESVLWCSYAQLCEAPLSALDFIGLCDRYRAILMDDLPCLSASQREGRIARGTEDGAQLVEAGDRELPQLSVHDDGVRRFIALVDECYDRKVPLYLEARVPLEALYTEGYLAFAFRRTLSRLREMQLARFGSDSAG |
3CO5 Chain:A ((26-121)) | -----------------------------------------------------RTSPVFLTGEAGSPFETVARYFHKNGT---PWVSPA-----RVEYLI------DMPMELLQ--KAEGGVLYVGDIAQYSRNIQTGITFIIGKAERCRVRVIASCSYAAGS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57121 for 664 contacts (-86.0/contact) +
2D Compatibility (PS) -10066 + (NN) -3664 + (LL) 21656
1D Compatibility (HY) 1200 + (ID) 550
Total energy: -48545.0 ( -73.11 by residue)
QMean score : 0.446
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