Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILS-DGSLYLIYRRATEHV----------GG-S-DGR-VVFSKLEGGIWSAPTIVAQAG----GQ-DF-RDVAGGTMP----SGRIVAASTVYE----TGEVKVYVSDDSGVTWVHKFTLARGGADYNFAHGKSFQVG-ARYVIPLYAATGVNYELKWLESSDGGETWGEGSTIYSGNTPYNETSYLP--------VGDGVILAVARVGSGAGG-ALRQFISLDDGGTWTDQGNVTAQNGDSTDILVAPSLSYIYSEGGTPHVVLLYTNRTTHFCYYRTILLAKAVAGSSGWTERVPVYSAPAASGYTSQVVLGGRRILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 1W8O Chain:A ((82-333)) | --------------------GFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAASGEGIQLRYGPHAGRLIQ-QYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGVGM----DENK-TVELSDGRVLLNSRDSAR-SGYRKVAVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPGSMSYSTLTALPDG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34703 for 1660 contacts (-20.9/contact) +
2D Compatibility (PS) -23977 + (NN) -11970 + (LL) 11688
1D Compatibility (HY) 400 + (ID) 1950
Total energy: -60512.0 ( -36.45 by residue)
QMean score : 0.288
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