Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQIRADFDSGNIQVIDASDPRRIRLAIRPDLASQHFQWFHFKVEGMAPATEHCFTLVNAGQSAYSHAWSGYQAVASYDGERWFRVPSQYDADGLHFQLEPEESEVRFAYFEPYSRERHARLVERALG-IE-GVERLAVGTSVQGRDIELLRVRRHP----DSHLKLWVIAQQHPGEHMAEWFMEGLIERLQRP--DDTEMQRLLEKADLYLVPNMNPDGAFHGN--------LRTNAAGQDLNRAWLEP----SAERSPEVWFVQQEMKRHGVDLFLDIHGDEE-IPHVFAAGCEG------NPGYTPRLERLEQRFREELMARG-EFQIRHGYPR---------SAPGQANLALACNFVGQTYDCLAFTIEMPFKDHDDNPEPGTGWSGARSKRLGQDVLSTLAVLVDELR |
| 1H8L Chain:A ((10-297)) | ---------------------------------------------------------------------------------------------------------------HHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPETLAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDEQGIAIYSKSPD-DAVFQQLALSYSKENKKMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKY---------PKAEELPKYWEQNRRSLLQFIK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107007 for 2110 contacts (-50.7/contact) +
2D Compatibility (PS) -27572 + (NN) -13101 + (LL) 7512
1D Compatibility (HY) -9600 + (ID) 2450
Total energy: -152218.0 ( -72.14 by residue)
QMean score : 0.551
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