Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKIKRGLDLPISGAPEQRIEAARPVRSVALIGFDYHGMKPTMAVQVGDRVKLGQVLFTDKKNPSVSY----TAPGAGVVSAIHRGEKRVLQSVVIDLDGDEQLEFARYPADKLATLSAEQVRDNLLQSGLWTALRTRPFSKVP-DPESSPSSIFVTAIDTQPLAADPQVVIAEQGEAFQAGLTVL-----GRLARVFLCKAEGVS-----LPGEALSGVTAQAFS-GPHPAGLPGTHIHFLDPVGAGKSVWNLNYQDVIAIGKLFTTGQLWTERVIALAGPVVEKPRLVRTRLGANLDELAAGQLQPGNNRLISGSVLGGRTAHGAYAYLGRYHLQLSCLKEGDQREFLHYLRAGVEKHSLLNVFVSRLLGGKRFAFTTSTNGSPRAMVPVGNYEAVMPLDILPTQLLRYLIVGDTEMAQKLGALELDEEDLALCSYVCAGKYEYGPILRDNLARIEQEG |
| 3WUW Chain:G ((16-301)) | --------------------------------------------------------------KPFLSAWPSAVVPRGGHVTLRCHYRHRFNNFMLYKEDRIHIPIFHGRIFQESFNMSPV----TTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKP------SLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQL-----------------SAPSDPLDIVVTGPY-EKPSLSAQP---------GPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGG---------TYRCFGSFRHSPYEWSDPSDPLLV------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54636 for 1904 contacts (-28.7/contact) +
2D Compatibility (PS) -28244 + (NN) -11379 + (LL) 13388
1D Compatibility (HY) 0 + (ID) 2700
Total energy: -83571.0 ( -43.89 by residue)
QMean score : 0.240
|
|
|