Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------MAITALPSADGQE--LTIQIQGRFDFGAHQDFRDAYERVAITPRRYVVDLRNATYLDSSALGMLLLLRDHAGGENAQISLANCSPEVRKILAISNFEQLFKIS-------------------
3LLO Chain:A ((1-143))
SPSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSA------NIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTSNRFFENPALKELLFHSIHDAVLGSQVREA
General information:
TITO was launched using:
RESULT:
Template:
3LLO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54030 for 574 contacts (-94.1/contact) +
2D Compatibility (PS) -10052 + (NN) -3805 + (LL) 836
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -74301.0 ( -129.44 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_3LLO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LLO-query.scw
PDB file :
Tito_Scwrl_3LLO.pdb
: