Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
2AMT Chain:D ((1-155))
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLI--
General information:
TITO was launched using:
RESULT:
Template:
2AMT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121611 for 1338 contacts (-90.9/contact) +
2D Compatibility (PS) -17095 + (NN) -11628 + (LL) 244
1D Compatibility (HY) -17200 + (ID) 5550
Total energy: -172840.0 ( -129.18 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_2AMT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AMT-query.scw
PDB file :
Tito_Scwrl_2AMT.pdb
: