Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MKNAMQVLRTWAARGV---------QWV-GVAGVIGLSGAAQAGDYDGSPQVAEFVSEMTRDYGFAG--EQLMGLFRDVNRKQS-ILDAIS-RPAERVKQWKEYRPIFISDARISRGVDFWNKHAEDLARAEKEYGVPAEIIVSIIGVETFFGR--NTGSYRVMDALSTLG-FDYPPRADFFRKELRE-----FLLLAREQQVDPLSLTGSYAGAMGLPQFMPSSF-----RAYAVDFDGD--GHINIWSDPTDAIG-SVASYFKQHGWVTGEPVVSVAEINDESA-ESAVTRGVDPTMSLGELRARGWRTHDALRDDQKVTAMRFVGDKGIEYWVGLPNFYVITRYNRSAMYAMAVYQLAGEIARARGAH |
| 4UY5 Chain:A ((2-327)) | TLSLANYLAADSAAEALRRDVRAGLTAAPKSLPPKWFYDAVGSDLFDQITRLPEYYPTRTEAQILRTRSAEIIAAAGADTLVELGSGTSEKTRMLLDA--MRDAELLR---RFIPFDVDAGVLRSAGAAIGAEYPGI-----------EIDAVCGDFEEHLGKIPHVGRRLVVFLGSTIGNLTPAPRAEFLSTLADTLQPGDSLLLGTDLVKDTGRLVRAYDDAAGVTAAFNRNVLAVVNRELSADFDLDAFEHVAKWNSDEERIEMWLRARTAQHVRV--AALDLEVDFAAGEEMLTEVSCKFRPENVVAELAEAGLRQTHWWTDPA--------GDFGLSLAVRLEHHH----------------------------H |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60036 for 2095 contacts (-28.7/contact) +
2D Compatibility (PS) -29549 + (NN) 4360 + (LL) 5148
1D Compatibility (HY) -7600 + (ID) 3200
Total energy: -90877.0 ( -43.38 by residue)
QMean score : 0.292
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