Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALG--GAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSA--DPLRQLARYI-VERRN |
| 3M9U Chain:B ((8-299)) | -LIAFEDQWVPALNAPLKQAILADSQDAQ-LAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQ---ALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAG-LILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVS-------------DEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTER-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3M9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121282 for 2230 contacts (-54.4/contact) +
2D Compatibility (PS) -30819 + (NN) -30332 + (LL) 1256
1D Compatibility (HY) -22400 + (ID) 6150
Total energy: -209727.0 ( -94.05 by residue)
QMean score : 0.552
|
|
|