Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQ----------IQRL---AYLEPECRVAEMLDHAGLERALR--GLDGVIFSAGYYPSRP--RRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR--NGLPVVIGIPGMVLGELDIGP----------TTGRVITAI-GNG--EMTHY------VAG--QRNVIDAAEAGRGLLMALERG---RIGERYLLTGH-NLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 1EK6 Chain:A ((2-343)) | -----------AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQY-LPLDEAHPT---GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV-VAR------------R-----E--------GDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSG-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -164100 for 2528 contacts (-64.9/contact) +
2D Compatibility (PS) -32697 + (NN) -12357 + (LL) 2636
1D Compatibility (HY) -7600 + (ID) 2800
Total energy: -216918.0 ( -85.81 by residue)
QMean score : 0.467
|
|
|