Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTVKTVRELRAAVARA-RSEGKRIGFVPTMGNLHAGHAALVKKAGE-RADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDGMDGQTRIHVPGVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIRKLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAGAEDFPALLADARQALEQAGLRPDYLEIREPISLRPGVPGDRQLVILAAAYLGSTRLIDNLSVHLD |
4DDM Chain:B ((21-287)) | -----------ADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ------------TPDDDLAQLRAEGVEIAFTPTTAAMYPDGL--RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDA--APGVAVDYLELRD-IGLGP-MPLNGSGRLLVAARLGTTRLLDNIAIEI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DDM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167241 for 2036 contacts (-82.1/contact) +
2D Compatibility (PS) -28261 + (NN) -17177 + (LL) 828
1D Compatibility (HY) -21200 + (ID) 6250
Total energy: -239301.0 ( -117.53 by residue)
QMean score : 0.548
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