Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MTPQPLADNLSPPDPARLAQSIKDWGRELGFQQVGISDV----------------ELGEHEAHLQRWLEAGYH-----------------GEMDYMAAHGSKRSRP------AELVPGTLRVISLRMDYLPGD-------------TRMAQVLATPEKAYVSRYALGRDYHKLIRKRLQQLAERIQAEVGPFGFRAFVDSAPVLEKAIAEQAGLGWIGKNTLVLNRKAGSYFFLGELFVDMPLPVDP--AMDSEHCGRCSACLDICPTAAFVG----------PYRLDARRCISYLTIEYKGAIPLELRPLIGNRVFGCDDCQI-VCPWNRFARPTGQGDFQPRHSLDNAELAELFLWSEEEFLGRTEGSPLRRAGYERWLRNLAVGLGNAPSTIPVLEALKARRGFPSELVREHVEW---ALRRHGET------------ |
| 4LL8 Chain:A ((99-536)) | ERAAAQSSLIQSHMQSLAANKPSRLSDEVKSMKQELAFIENVIAQANKPKLVNVIRRESGNPDLLELLMDLNSYTLEVTEGYLKKVNVTEVNGDNVLGPIHVITTVVSSLVRNGLLIQSSKFISKVLLTVESIVMSLPKDETMLGGIFWLSNLSRLPAFAANQKTLYEANGGDEKD--KLTLIYLNDLENETLKVFDKIYSTWLVK---FMKHASAHIEIFDMVLNEKLFKNSGDEKFAKLFTFLNEFDAVLSKFQVVDSMHTKIFNDTLKYLNVMLFNDLITKSPALNWKYGYEVDRNIERLVSWFEPRIE-DVRPNLIQIIQAVKILQLKISNLNEFKLL-----FDFWYALNPAQIQAILLKYKPANKGE-AGVP------NEILNYLANVIKRENLSLPGKMEIMLSAQFDS--AKNHLRYDTSAITQNSNTEGLATVSKIIKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92105 for 2230 contacts (-41.3/contact) +
2D Compatibility (PS) -35729 + (NN) -6026 + (LL) 812
1D Compatibility (HY) -16400 + (ID) 3250
Total energy: -152698.0 ( -68.47 by residue)
QMean score : ?
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