Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYIGKGYQVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLYSSLEDVDRARERRLAELDGLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQKAREDAERTYAADRARLSQLLGVSP |
| 4BWD Chain:A ((9-69)) | ---------------------------------------------------------------------------------------------------------------------------------VDAENQVELEEKTRLINQVMELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSAS--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 7255 for 235 contacts (30.9/contact) +
2D Compatibility (PS) -6985 + (NN) -2792 + (LL) 9792
1D Compatibility (HY) 400 + (ID) 450
Total energy: 7220.0 ( 30.72 by residue)
QMean score : 0.687
|
|
|