Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQ---------------------LNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVPVE----GDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQ----LDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNR---GIVVDRSLRTSHANIYALGDCAEVDG-----LNLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTV--------------KTPACPLVVSPPPRGMDGQWLVEGSGT--------------DLKVLCRDTAGRVIGYALTG-----AAVNEKLALNKELPGLMA----- |
| 1M6I Chain:A ((8-488)) | APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHEDLNEVAKLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271865 for 3120 contacts (-87.1/contact) +
2D Compatibility (PS) -41436 + (NN) -13802 + (LL) 44
1D Compatibility (HY) -11200 + (ID) 3700
Total energy: -341959.0 ( -109.60 by residue)
QMean score : 0.381
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