Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNRGVVYLGPGKVEVQNIPYPKMQDPQGRQIDHGVILRVVSTNICGSDQHM------VRGRTTAPEGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCRTCKEQHTGVCLTVNPARAGGAYGYVDMGGWVGGQAEYVLVP--YADFNLLKLPNREAAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASARLLGAAVVIVGDVNPTRLAHAKKQGFEIADLSKDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHSGSQQEAPATVLNSLMGITRVAGKIGIPGLYVTEDPGAVDAAAKHGALSIRFGLGWAKSHSFHTGQTPVMKYNRQLMQAIMWDRIKIADIVGVEVITLDDAPKGYGEFDAGVPKKFVIDPHNLFRAA |
| 2EJV Chain:A ((28-220)) | ------------------------------------ILVRVEAASICGTDLHIWKWDAWARGRIRPP--LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCL--NTQILG-----VDRDG---GFAEYVVVPAENAWVNPKDLPFEVAAI-----LEPFGNAVHTVYAGS---GVS-GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVN-----PLEEDL-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97297 for 1398 contacts (-69.6/contact) +
2D Compatibility (PS) -19449 + (NN) -3074 + (LL) 11220
1D Compatibility (HY) -12000 + (ID) 4000
Total energy: -124600.0 ( -89.13 by residue)
QMean score : 0.474
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