Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPLCPSPWLPLLIPAPAPGLTVQLLLSLLLLVPVHPQRLPRMQEDSPLGGGSSGEDDPLGEEDLPSEEDSPREEDPPGEEDLPGEEDLPGEEDLPEVKPKSEEEGSLKLEDLPTVEAPGDPQEPQNNAHRDKEGDDQSHWRYG---GDPPWPRVSPACAGRFQSPVDIRPQLAAFCPALRPLELLGFQLPPLPELRLRNNGHSVQLTLPPG---LEMALG-PGREYRALQLHLHWGAAGRPGSEHTVEGHRFPAEIHVVHLST-AFARVDEALGRPGGLAVLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDISALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVMLSAKQLHTLSDTLWGPG---DSRLQLNFRATQPLNGRVIEASFPAGVDSSPRAAEPVQLNSCLAAGDILALVFGLLFAVTSVAFLVQMRRQHRRGTKGGVSYRPAEVAETGA |
| 2FOY Chain:A ((5-260)) | --------------------------------------------------------------------------------------------------------------------------------------------WGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISV-SYNP--ATAKEIINVGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKVG-EANPKLQKVLDALQAIKTKGKRAPFTNFDPSTLLPSSL-DFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHNNRPTQPLKGRTVRASF--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126296 for 1981 contacts (-63.8/contact) +
2D Compatibility (PS) -26316 + (NN) -14493 + (LL) 7792
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -179813.0 ( -90.77 by residue)
QMean score : 0.239
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