Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MQPSPPPTELVPS----ERAVVLLSCALSALGSGLLVATHALWP----DLRSRARRLLLFLSLADLLSAASYFYGVLQNFAGPSWDCVLQ------GALSTFANTSSFFWTVAIAL----YLYLSI---VRAARGPRTDRLLWAFH-------VVSW----------------GVPLVITVAAVALKKIGYDASDVSVGW------CWIDLEA-KDHVLWMLLTGKLWE-------MLAYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFI----GLRVWSTVRFVLTLCG--------SPAVQTPVLVVLH----------GIGNTFQGGANCIMFVLCTRAVRTRLFSL---CCCCCSSQPPTKSPAGTPKAPAP-------SKPGESQESQGTPGELPST-------------- |
| 3K9D Chain:A ((3-456)) | LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVLELEDIR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -253967 for 2611 contacts (-97.3/contact) +
2D Compatibility (PS) -35914 + (NN) -13424 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 2400
Total energy: -309305.0 ( -118.46 by residue)
QMean score : 0.199
|
|
|