Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MANVTLVTGFLLMGFSNIQKLRILYGVLFLLIYLAALMSNLLIITLITLDVKLQTPMYFFLKNLSFLDVFLVSVPIPKFIVNNLTHNNSISILGC----AFQLLLMTSFSAGEIFILTAMSYDRYVAICCPLNY---EVIMNTGVCVLMASVSWAIGGLFG--------------------TAYTAGTFSMPF-CGSSVIPQFFCDVP----SLLRISCSETLMVIYAGIGVGACLSISC-FICIVISYIYIFSTVLKIPTT--KGQS--KAFSTC-FPHLTVFTVFIITAYFVYLKPPSNSPSVIDRLLSVIYTVMPPVFNPVTYSLRNNDMKCALIRLLQKTYGQEAYFI |
| 4RNZ Chain:A ((1-369)) | MERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFK--RLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGPHLHFGVYKNSRPINPLGYIRTAKSKLH--GKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -323591 for 2179 contacts (-148.5/contact) +
2D Compatibility (PS) -31855 + (NN) 11895 + (LL) 960
1D Compatibility (HY) -2800 + (ID) 2650
Total energy: -348041.0 ( -159.73 by residue)
QMean score : 0.185
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