Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNSTTVMEFLLMRFSDVWTLQILHSASFFMLYLVTLMGNILIVTVTTCDSSLHMPMYFFLRNLSILDACYISVTVPTSCVNSLLDSTTISKAGCVAQVFLVVFFVYVELLFLTIMAHDRYVAVCQPLHYPVIVNSRICIQMTLASLLSGLVYAGMHTGSTFQLPFCRSNVIHQFFCDIPSLLKLSCSDTFSNEVMIVVSALGVGGGCFIFIIRSYIHIFSTVLGFPRGADRTKAFSTCIPHILVVSVFLSSCS-SVYLRPPAIPAATQDLILSGFYS-IMPPLFNPIIYSLRNKQIKVAIKKIMKRIFYSENV |
| 3WI3 Chain:A ((8-275)) | --------------YSD--PKEYIESKYYDALF------------------SIHTPLAYFVKS-----------------NLVRLKNTCRTKYG--SDSYKIAYQAMLQKFLLSIVQFKDRHD-NRLLLEP---FSSPIADEKRKNCLTKFVIQDENKNSS----------------TIADLCVVLKSREIKLQILLLLEIIGLNDLDWNF----------------RDFDYCEQLDLYLDRACILDILLSSETGTIQEHKKNILDKSKEASLVGFINYVLIPYFN--------KKVPHAVEFIIQKLKGPS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208817 for 1593 contacts (-131.1/contact) +
2D Compatibility (PS) -21620 + (NN) -3472 + (LL) 9016
1D Compatibility (HY) -12400 + (ID) 2000
Total energy: -239293.0 ( -150.22 by residue)
QMean score : 0.115
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