Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLGLNGTPFQPATLQLTGIPGIQTGLTW------------VALIFCILYMISIVGNLSILTLVFWEPALHQPMYYFLSMLALNDLGVS-FSTLPT----VISTFCFNYNHVAFNACLVQMFFIHTFSFMESGILLAMSL---DRFVA--ICYPLRYVTVLTHNRILAMGLGILT----KSFTTLFPFPFVVKRLP-FCKGNVLHHSYCLHPDLMKVACGDIHVNNIYGLLVIIFTYGMDSTFILLSYALILRAMLVIISQEQRL-----KALNTCMSHICAVLAFYVPIIAVSMIHRFWKSAPPVVHVMMSNVY----LFVPPMLNPIIYSVKTKEIRKGILKFFHKSQA-------- |
| 4V1S Chain:A ((37-395)) | PGVEIGNNDYYTWCKETLSVIDKDLKISGTHSYYENQDRSQVSFIWGNIFLLYTYTEGISLSKSEWSDALMNCFLNFDNYWHPNYKGIAGYATLPTSAEKVPDRFYDENGWTAIGLCDAYLATQNNSYLEKAKGALAFSLSGEDNVLGGGIYFQETFVSLPVQKNTICSAVTMLSCMKLYEITQDRQYLDAAIRINDWTVENLLDKSDNLLWDAKMVADGSVNTQKWSYNAGFMIRSWLKMYQATKDEKYLSQAKATLASSEAKWYNSINGALNDPGYFAFSIIDSWFDMYDTDKNTVWLTKAFHAINFIHNKLRDGNGRYPEHWGTPTTSNLEKYDLRFSTVAAYMYMRAANYKRILN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -355246 for 2649 contacts (-134.1/contact) +
2D Compatibility (PS) -31060 + (NN) 8149 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 2250
Total energy: -382807.0 ( -144.51 by residue)
QMean score : 0.225
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