Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSISNITVYMPSVLTLVGIPGLESVQCWIGIPFCAIYLIAMIGNSLLLSIIKSERSLHEPLYIFLGMLGATDIALASSIMPKMLGIFWFNVPEIYFDS-CLLQMWFIHTLQGIESGILVAMALDRYVAICYPLRHANIFTHQLVIQIGTMVVLRAAILVAPCLVL----------IKC---------RFQFYHTTVISHS-YCEHMAIVKLAAANVQVNKIYGL--FVAFTV----------------AGFDLTFITLSYIQIFITVFRLPQKEARFKAFNTCIAHICVFLQ----FYLLAFFSFFTHR---------FGSHISPYIHILFSSIYLLVPPFLNPLVYGAKTTQIRIHVVKMFCS |
| 4XNV Chain:A ((38-382)) | --------SFKCALTKTGF-----QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLT-LPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNS--CVNPILYFLAGDTFRRR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245131 for 2028 contacts (-120.9/contact) +
2D Compatibility (PS) -29266 + (NN) -4400 + (LL) 1580
1D Compatibility (HY) -21200 + (ID) 2500
Total energy: -300917.0 ( -148.38 by residue)
QMean score : 0.173
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