Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAANESSEGISFVLLGLTTSPGQQRPLFVLFLLLYVASLLGNGLIVAAIQASPALHAPMYFLLAHLSFADLCFASVTVPKMLANLLAH-DHSISLAGCLTQMYFFFALGVTDSCLLAAMAYDCYVAIRHPLPYATRMSRAMCAALVGMAWLVSHVHSLLYILLMARLSFCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVV--VTPFLLILASYGAIAAAVLQLPSASGRLRAVSTCG------------------SHLAVVSLFYGTVIAVYFQATSRREAEWGRVATVMYTVVTPMLNPI----IYSLWNRDVQGALRALLIGRRISASDS--------------------------- |
| 4XNV Chain:A ((38-382)) | SFKCALTKTGF------------QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYV-LTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSL-GRLKKKNAICISVLVWLIVVV-AISPILFYSGTGVRKNKT---ITCYDTT------SDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALI----YKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195655 for 1903 contacts (-102.8/contact) +
2D Compatibility (PS) -30183 + (NN) -13127 + (LL) 1456
1D Compatibility (HY) -21200 + (ID) 2500
Total energy: -261209.0 ( -137.26 by residue)
QMean score : 0.237
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