Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMIKKNASSEDFFILLGFSNW---------------PQLEVVLFVVILIFYLMTLTGNLFIIILSYVDSHLHTPMYFFLSNLSFLDLCHTTSSIPQLLVNLRGPEKTISYAGCMVQLYFVLALGIAECVLLVVMSYDRYVAVCRPLHYTVLMHPRFCHLLAAASWVIGFTISALHSSFTFWVPLCGHRLVDHFFCEVPALLRLSCV-------DTHANELTLMVMSSIFVLIPLILILTAYGAIARAVLSMQSTTG----LQKVFRTCGAHLMVVSLFFIPVMCMYLQPPSENSPDQGK-------FIALFYTVVTPSLNPLIYTLRNKHVKGAAKRLLGWEWGK--------------------- |
| 1U19 Chain:A ((4-349)) | ---MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMALACAA--------PPLVGW---SRY---IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250601 for 2312 contacts (-108.4/contact) +
2D Compatibility (PS) -30083 + (NN) -5392 + (LL) 2108
1D Compatibility (HY) -5600 + (ID) 650
Total energy: -290218.0 ( -125.53 by residue)
QMean score : 0.210
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