Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKSNSSVVSEFVLLGLCSSQKLQLFYFCFFSVLYTVIVLGNLLIILTVTSDTSLHSPMYFLLGNLSFVDICQASFATPKMIADFLSAHETISFSGCIAQIFFIHLFTGGEMVLLVSMAYDRYVAICKPLYYVVIMSRRTCTVLVMISWAVSLVHTLSQLSFTVNLPFCGPNVVDSFFCDLPRVTKLACLDSYIIEILIVVNSGILSLSTFSLLVSSYIIILVTVWLKSSAAMAKAFSTLASHIAVVILFFGPCIFIYVWPFTISPLDKFLAIFYTVFTPVLNPIIYTLRNRDMKAAVRKIVNHYLRPRRISEMSLVVRTSFH- |
| 3DOA Chain:A ((1-279)) | -----------MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQNHQLLLSIHPNFSRLQLTTKPPMFARVFRKHLEG----------GIIESIKQIGNDRRIEIDIKSKDEIGDTIYRTVILEIMGKHS--NLILVDENRKIIEGFKHLTPRTVMP-------GFNYEAPPTQHKINPYDITGAEVLKYIDFNAG---------------------NIAKQLLNQFEGFSPLITNEIVSRRQ-------FMTSSTLPEAFDEVMAETKLPPTPIFHNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRFYDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -318532 for 2054 contacts (-155.1/contact) +
2D Compatibility (PS) -27506 + (NN) 3092 + (LL) 4796
1D Compatibility (HY) -2000 + (ID) 1600
Total energy: -341750.0 ( -166.38 by residue)
QMean score : 0.200
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