Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------METANYTKVTEFVLTGLSQT-------PEVQLVLF--------VIFLSFYLFILPGNILIICTISLDPHLTSPMYF-------------LLANLAFLDIWYSSITAPEMLIDFFVERKIISFDGCI---AQLFFLHFAGASEMFLLTVMAFDLYTA---ICRPLHYATIMNQRLCCILVALSWRGGFIHSIIQVALIVRLPFCGPNELDSYFCDITQVVRIACANTFPEELVMICSSGLISVVCLIALLMSYAFLLALFKKLSGSGENTNRAMSTCY-----SHITIVVLMF--GPSIYIYARPFDSFSLDKVVSVFNTLI--FPLRNPIIYTLRNKEV--------KAAMRKLVTKYILCKEK- |
| 1A6Q Chain:A ((2-368)) | GAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEK--KHGADRSGSTAVGVLISPQHTYFINC-GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIER----SEEDDQFIILACDGIWDVMGNEEL---CDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -346522 for 2559 contacts (-135.4/contact) +
2D Compatibility (PS) -31747 + (NN) -378 + (LL) 1428
1D Compatibility (HY) -3600 + (ID) 2350
Total energy: -383169.0 ( -149.73 by residue)
QMean score : 0.152
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