Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MDWENCSSLTDFFLLGITNNPEMKVTLFA--VFLAVYIINFSA------------NLGMIVLIRMDYQLH-----TPMYFFLSHLSFCDLCYSTAT--GPKMLVDLLAKNK--SIPFYGCAL----------QFLVFCIFADSECLLLSVMAFDRYKAIIN-------PLLYTVNM------SSRVCYLLLTGVYLVGI--------ADALIHMTLAFRLCFCGSNEINHFFCDIPP-------LLLLSRSDTQVNELVLFTVFGFIELSTISGVFISYCYIILSVLEIHSAEGRFKALSTCTSHLSAVAIFQGTLLFMYFRPSSSYSLDQDKMTSLFYTLVVPMLNPLIYSLRNKDVKEALKKLKNKILF |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLDVPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPVSSTASQLTNYKVWRNPYLCSQDPRDKFAPDNLVIEEDGIYRIDISG--SINIANYTFPARVGGRYFQIVCARNSSANN----LAEFGAEQHLPPSGVWT------RRVLVGEYTAGM---TEQAFSSVATISLFKGDNFFLQFETGTNTS--RDSAYNNGYGTSGTHLRNFSYTLERVGDLNGTAYYDNGTF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275692 for 2099 contacts (-131.3/contact) +
2D Compatibility (PS) -29893 + (NN) 12600 + (LL) 1732
1D Compatibility (HY) -6400 + (ID) 3050
Total energy: -300703.0 ( -143.26 by residue)
QMean score : 0.096
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