Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPENFTRVTEFILTGVSSCPELQIPLFLVFLVLYVLTMAGNLGIITLTSVDSRLQNPMYFFLRHLAIINLGNSTVIAPKMLMNFLVKKKTTSFYECATQLGGFLFFIVSEVMMLAVMAYDRYVAICNPLLY-----MVVVSRRLCLLLVSLTYLYGFSTAIVVSPCIFSVSYCSSNIINHFYCDI----APLLALSCSDTYIPETIVFISAATNLVFSMITVLVSYFNIVLSILRI---RSPEGRKKAFSTCASHMIAVTVFYGTMLFMYLQPQTNH-----------------SLDTDKMASVFYTLV----------IPMLNPLIYSLRNNDVNVALKKFMENPCYSFKSM |
| 3ZSC Chain:A ((4-332)) | -----------DKPVGFASVPTADLP---------EGTVGGLGGEIVFVRTAEELEKYT--TAEGKYVIVVDGTIVFEPKREIKVL-SDKTIVGINDAKIVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAY--KVTYHHNYFKNLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPVEGYLTLGEGDAKNEFYYCKEPEVRPVEEGKPALDPREYYDYTLDPVQDVPKIVVDGAGAGKLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -325321 for 2564 contacts (-126.9/contact) +
2D Compatibility (PS) -29786 + (NN) 10032 + (LL) 2792
1D Compatibility (HY) -2400 + (ID) 2350
Total energy: -347033.0 ( -135.35 by residue)
QMean score : 0.222
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