Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MEQDEIRLIIDELIRIIPFEGISDKTLLKVCTDLNLANSFCKFQNGIYSALECIVEDLNSSMEAELRNFNLEDMKVQEQIKLAVQICLSNYATLPNYREFLKNILSFSVLPKNIYFSSKLLCRIVDMIWYGIHDQSTDFNYYTKRAILAGVYLSIILFFINDYSEGFA-DTLSFLDRCIN-NVMTFQKFKIHLKEIVGSFL
3KKC Chain:A ((1-177))
SNAMVKDRQIQKTKVAIYNAFISLLQENDYSKITVQDVIGLA-NVGRSTFYSHYES-KEVLLKELCEDLFHHLFKQGRDVT------------FEEYLVHILKHFEQNQDSIATLLL----SDDPYFLLRFRSELEHDVYPRLREEYITKVDIPEDFLKQFLLSSFIETLKWWLHQRQKMTVEDLLKYYLTMVER-----------------
General information:
TITO was launched using:
RESULT:
Template:
3KKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120381 for 1115 contacts (-108.0/contact) +
2D Compatibility (PS) -17042 + (NN) -4761 + (LL) 3468
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -144616.0 ( -129.70 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_3KKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KKC-query.scw
PDB file :
Tito_Scwrl_3KKC.pdb
: