Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MAVPDRRVSKTRAAKRRTHYSVKLAKPVKAKDGTWKLPHHINKFTKEY-------
2EE1 Chain:A ((1-64))
GSSGSSGKPEWMMIHRILNHSVDKKGHVHYLIKW-RDLPYDQASWESEDVEIQDYDLFKQSYWNH
General information:
TITO was launched using:
RESULT:
Template:
2EE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12485 for 254 contacts (49.2/contact) +
2D Compatibility (PS) -4678 + (NN) 1273 + (LL) 144
1D Compatibility (HY) -2400 + (ID) 300
Total energy: 6524.0 ( 25.69 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_2EE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EE1-query.scw
PDB file :
Tito_Scwrl_2EE1.pdb
: