Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNYSYKNIQAIDFTQLNDEEKLLVLEFRNH-PNTALWMYSANISLKTHLQFIEDLKNS---PSHRYFLFK--EESVYLGVGSITKINFFHKHGYLGIYKNPFLK--NKGGTILKALERIAFEEFQLNSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKDKEFIDVLLYYKDKKGYNDQSPLKL
2FCK Chain:A ((12-181))
---------TQRLQLRLITADEAEELVQCIRQSQTLHQWVDW--FSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFYHTFNMASLGYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSLIP-----------
General information:
TITO was launched using:
RESULT:
Template:
2FCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62027 for 1147 contacts (-54.1/contact) +
2D Compatibility (PS) -16654 + (NN) -2689 + (LL) 656
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -85914.0 ( -74.90 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_2FCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCK-query.scw
PDB file :
Tito_Scwrl_2FCK.pdb
: