Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVNYIVEEVNQ--KEVDMVLIGGDLVDE-NIEKVKSFLLPLNNLKSTHG--TFYVPGNHEYYHGIEPILSFLNTLDMTILGNECVHLGGINLCGVYDYFARK-----RQDFAPDIDKALKKRDSSKPTILLAHQP----------------KQIRSLKESHSIDLVLSGHTHAGQIFP---FSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
2HY1 Chain:A ((12-267)) | --------------------------------------------------------------------------------------------------------------------------------------------PRPDYVLLHISDTHLID--ADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPL--DRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCGCNLVHVYPDTVVHSVIP---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130143 for 1610 contacts (-80.8/contact) +
2D Compatibility (PS) -21462 + (NN) -5193 + (LL) 14132
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -151016.0 ( -93.80 by residue)
QMean score : 0.375
|
|
|