Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLETLESILERLRMSIKKNGLKNSKQREEVVSVLYRS-GTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFICVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIEHRQNEVVKKYQAKLISHDMKMFVWCKECQESDD
2W57 Chain:A ((3-133))
------------DNNQALKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQLTNHSLYLYGKC--------
General information:
TITO was launched using:
RESULT:
Template:
2W57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38654 for 842 contacts (-45.9/contact) +
2D Compatibility (PS) -13876 + (NN) -502 + (LL) 1744
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -62838.0 ( -74.63 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_2W57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W57-query.scw
PDB file :
Tito_Scwrl_2W57.pdb
: