Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNEVQGIGIPTSHASVQTTPTKEISRTNTINTVDESKTTIDPDQYKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLVVSVKDANGDKVIREIPSKEAVELMQRMRDVIGIIFDKRG
4YVQ Chain:A ((1-89))
-----------------------MLETVPTIKKLRAYAERIRVAELEKCMS-----------KMGDDINKKTTRAVDDLSRGIVNRFLHGPMQHLRCRTLSETLENMHALNRMYGLEK-
General information:
TITO was launched using:
RESULT:
Template:
4YVQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2735 for 481 contacts (5.7/contact) +
2D Compatibility (PS) -8530 + (NN) 2197 + (LL) 2168
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -5530.0 ( -11.50 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_4YVQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YVQ-query.scw
PDB file :
Tito_Scwrl_4YVQ.pdb
: