Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAAGISTAQFDCIAQIGLD--KEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTK---TGREKHITLTEKGQACYRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE
3BRO Chain:A ((6-138))
-----RDLGRLLKIA----SNQMSTRFDIFAKKYDLTGTQMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLETIILSYMDSDQSQMTSGLNKEEVVFLEKILKRMI-
General information:
TITO was launched using:
RESULT:
Template:
3BRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27472 for 801 contacts (-34.3/contact) +
2D Compatibility (PS) -14354 + (NN) -6554 + (LL) 1072
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -53908.0 ( -67.30 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_3BRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BRO-query.scw
PDB file :
Tito_Scwrl_3BRO.pdb
: