Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGDAIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKV--KDIEIMIASHSDADNIGGLPEVMNNIKVKNLYAPKSTNTTAAYKNFVN-------TAK-KKKLTIKTAKAGVKLPVKGVNAQFVGPV-KTYGKTDRNNWSAVLHVAYK----KNTFLF--TGDAQTKAENDMIKAKKTLRADVLKVSTQGSKAATSKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 3M8T Chain:A ((45-208)) | --------------------------------DNIYYVGTDGIAVYVIKT-SQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGA-QLVAGERDKP--LLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHS-----P--GCTSWEMTVKDGKEDREVLFFCSGTVALN------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53328 for 1168 contacts (-45.7/contact) +
2D Compatibility (PS) -15384 + (NN) 1136 + (LL) 8020
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -65906.0 ( -56.43 by residue)
QMean score : 0.489
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