Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKHLVEKMEIFKGNSKREIHKKIQLVTNEPYKITDERVTKLGIFKKQYEVTAVIMSEVAIADGRMDFQETFQKSVVKTRPKTDDLLKKEKLLEMLAAGAELAQSTPLLEERKTQEEELSSMRLELAALNRELAVKMREEREQNSDFVKFLKGRGISDTYVADFMQAGRKQFKQVET---AHLDDITDWFVPYLSGKLAVEDS------F-DLSGHRIISLIGQTGVGKTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELIVATS---PA-ELEEAVQYMTYVNCVDHILIDTVGRNYLAEESVSEISAYTDVVHPDLTCFTFSSGMKSADVMTILPKLA-EIPIDGFIITKMDETTRIGDLYTVMQETNLPVLYMTDGQNITENIFRPKSRWLAERFVGTDRRQVVE |
| 3E70 Chain:C ((53-324)) | --------------------------------------------------------------------------------------------------------------------------------------------DKALDELEIDLLEADVALEVVDALREKIKQKLVGKKVRIG--GKIIEEAVKEAVSEILETSRRIDLIEEIRKAEKPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAK-ARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGN-AIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVIDAPILFVGVGQG-YDDLRPFEKEWFLERIFG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142456 for 2078 contacts (-68.6/contact) +
2D Compatibility (PS) -27195 + (NN) -8915 + (LL) 14232
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -177384.0 ( -85.36 by residue)
QMean score : 0.612
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